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Maize Pilot GeneChip Array

Experiment Name: Maize Pilot GeneChip Array
Accession No. & GeneChip: ZM1, CornChip0
Submitter: Experimenter: Rico Caldo, submitted by Lishuang Shen
Experiment Type: genotype
Experiment Factor: genotype
Number of Replicates: 6
Quality Control Steps: biological replicates
technical replicates
Quality Control Description: None
Publication_id: None
Last Update Time: 2004-07-19 08:48:10
Expression Data
Access & Analysis:

Please select one action:

1. Batch download all data files at Download Center .

2. Browse Hybridizations and boxplots from experiment.

3. Visualization of hybridizations or treatment means with scatterplots and MvA plots.

4. Browse Samples from experiment.

5. Create Gene List by filter probe sets for differentially-expressed genes.

6. Pattern Recognition on filtered gene list.
 
Description: Goal 1: examine UV+ vs UV- results against published cDNA data
Goal 2: examine probe level behavior across strains
-identify outlier probe intensities
-establish minimum probe pair number across maximum # genotypes
-CV signal
Goal 3: examine level of variability between biological replicates of B73, Mo17, W23, & Wf9-BG (T cytoplasm; Rf1) gene lists detected signal.

Name: Rico Caldo
Institution: Iowa State University
Head of Laborotary: Roger Wise
email:
Homepage:

 

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