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BarleyBase Blast
To blast search BarleyBase database, you can either enter your query sequence in the textarea. Multiple sequences are supported. The search engine is provided by NCBI BLAST . For more information about the BLAST, please check their tutorials.
Search Sequences:
Must in FASTA format if Input Multiple Sequences
Database:
Barley1
Arabidopsis
BLAST Type:
Standard nucleotide-nucleotide BLAST [blastn]
Standard protein-protein BLAST [blastp]
Nucleotide query - Protein database [blastx]
Protein query - Translated database [tblastn]
Nucleotide query - Translated database [tblastx]
or
Options:
For advanced blasting
Expect:
Word Size:
7
11
15
Number of:
Descritpions
0
10
20
50
100
200
1000
Alignments
0
10
20
50
100
200
500
Matrix:
BLOSUM62
BLOSUM45
BLOSUM80
PAM30
PAM70
Other advanced:
or
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