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Barley1 GeneChip Probe Set: Contig2021_at
Name
Exemplar Sequence
Barley1_02021
:
BEST BLASTX PLANTS: 10/14/03 1. gb|AAD46520.1 0 AF149116_1 soluble inorganic pyrophosphatase [Populus tremula x Populus tremuloides] Length = 215; 2. gb|AAB88618.1 1e-099 inorganic pyrophosphatase [Zea mays] Length = 214; 3. T01370 1e-099 pir|| inorganic
Probes & Alignment
View Probe Sequences & Alignment
Expression of Contig2021_at
Experiment
1. TA1: Wheat--Rehybridization of Wheat and Barley cRNAs to the Affymetrix Wheat Genome Ar...
2. TA2: Wheat--Wheat GeneChip Test
3. OS1: Rice--Rice 57K Affymetrix GeneChip Test
4. ZM1: CornChip0--Maize Pilot GeneChip Array
5. BB1: Barley1--Cross-species Detection in Barley1 GeneChip Array
6. BB4: Barley1--Mla-specified Transcriptional Responses in Barley-Powdery Mildew Interactio...
7. BB5: Barley1--A Ca2+/calmodulin-dependent protein kinase required for symbiotic nodule de...
8. BB7: Barley1--mlo5-mediated resistance responses in barley
9. BB8: Barley1--Microarray of barley genes in wheat-barley chromosome addition lines
10. AT4: ATH1--Arabidopsis thaliana gene expression during floral transition and early fl...
11. AT5: ATH1--Arabidopsis gene expression atlas across developmental time
12. AT6: ATH1--Loss of a callose synthase results in salicylic acid-dependent disease resi...
13. AT8: ATH1--Expression analysis of Arabidopsis suspension cells during sucrose starvati...
14. AT10: ATH1--Arabidopsis thaliana gene expression after 6 days in shoot induction medium
15. AT11: ATH1--Transcriptome analysis of glyoxylate cycle knock-out mutants in early stage...
16. AT12: ATH1--Gene expression and carbohydrate metabolism through the diurnal cycle
17. AT13: ATH1--Impact of Type III effectors on plant defense responses
18. AT14: ATH1--Genes affected by hog1 alleviation of CHS silencing
19. AT15: ATH1--Analysis of anther development by analysing downstream genes controlled by ...
20. AT16: ATH1--Carbohydrate- and redox-regulation of gene expression in a TPT mutant
21. AT17: ATH1--Indole acetic acid treatment-dose response and time course
22. AT18: ATH1--The mechanisms involved in the interplay between dormancy and secondary gro...
23. AT19: ATH1--The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress respon...
24. AT20: ATH1--The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress respon...
25. AT23: ATH1--AtGenExpress: Pseudomonas half leaf injection
26. AT7: AG--The Transcriptional Innate Immune Response to flg22-Interplay and Overlap w...
Press Ctrl button, and click on experiments to be added for selecting multiple experiments.
Estimation
1. RMA-Robust Multi-Chip Average
2. Affymetrix MAS5.0 Suite Estimation
Expression Plots
View Interactive High-Resolution Version
Probe-Level Intensities
View, download probe values, and draw barplots
Expression Statistics
Estimation
Min.
1st Qu.
Median
Mean
3rd Qu.
Max
BB1
63.26
86.53
151.7
189.7
249.7
464.9
BB1
4.744
5.071
5.589
5.773
6.12
7.458
For each experiment's statistic, upper row (red) is for MAS 5.0 and lower row (blue) is for RMA (log2) estimation.
Contig2021_at and Co-expressed Genes in BB1:
Expression View
and Details
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