testls/R_PHP/probeplotout.txt
1.Plot by Hybridization--Vertical Version
2.Plot by Probe Pair Number--Vertical Version
1.Plot by Hybridization--Vertical Version
Labels on x-axis are probe pair numbers starting from 0 and numbered from 0 at 5' end to 3' end of exemplar sequence, in agree with Affymetrix convention. Lines on each bar are the standard deviation of the probe intensities. When comparing the hybridizations, please notice that different scales are used.
Alternative Plot : It uses same scale in all plots, showing the relative intensity for all hybridizations and probe pairs.
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2.Plot by Probe Pair Number--Vertical Version
Labels on x-axis are the number of hybridization, i.e. 1 is 1st hybridization. Lines on each bar are the standard deviation of the probe intensity.
Alternative Plot : It uses same scale in all plots, showing the relative intensity for all different hybridizations and probe pairs.
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