BarleyBase Documentation

1. For general questions, please view the BarleyBase Frequently Asked Questions.

2. Quick Tour and  General guidelines on data navigation, visualization and data analysis in BarleyBase are described.

3. For instructions on submission, please read the help file for BarleyExpress, our online submission tool.

4. For instructions on using experiment query and probe set query, visit BarleyBase Query Help page. To learn more about gene filtering based on expression profiles, go to filter tutorial.

5. To learn about the microarray data analysis methods available at BarleyBase, visit analysis methods page.

6. For Affymetrix GeneChip-related terms, you may find them at Glossary.

7. Introductions to BLAST tools at BarleyBase and PlantGDB can be found at Barley1 GeneChip and  http://www.barleybase.org/tools.php

8. Microarray related links and barley genomics related links are listed at the Links page.

9. BarleyBase database schema is developed according to MIAME guidelines on microarray experiment annotation.

10. A Microsoft PowerPoint Slide for a comprehensive expression data access and analysis tutorial (8M).

11. A new Microsoft PowerPoint poster for Plant and Animal Genome Conference XIII (2.8 M), San Diego, California, January 15-19, 2005.

12. A new Microsoft PowerPoint slide MGED7 poster (2.3 M) presented at 7th International Meeting of the Microarray Gene Expression Data Society, September 8-11, 2004.

13. A Microsoft PowerPoint Slide for a short tutorial (2.5M) on experiment submission flow through BarleyExpress.

14. More help files for usage of BarleyBase will be available soon.

For problems with the webpages, contact barleybasewebmaster